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    GVI51_G03421 SUMO-targeted ubiquitin ligase complex subunit SLX8 [ Nakaseomyces glabratus ]

    Gene ID: 2888230, updated on 6-Dec-2024

    Summary

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    Gene symbol
    GVI51_G03421
    Gene description
    SUMO-targeted ubiquitin ligase complex subunit SLX8
    Locus tag
    GVI51_G03421
    See related
    FungiDB:GVI51_G03421; VEuPathDB:GVI51_G03421
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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    Genomic context

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    See GVI51_G03421 in Genome Data Viewer
    Location:
    chromosome: G
    Exon count:
    1
    Sequence:
    Chromosome: G; NC_088957.1 (358650..359282, complement)

    Chromosome G - NC_088957.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene 60S ribosomal protein uL14 Neighboring gene osmosensor SHO1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088957.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0G03553g
      Ortholog(s) have ubiquitin-protein transferase activity and role in cellular response to DNA damage stimulus, protein sumoylation, protein ubiquitination, telomere maintenance

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SUMO-ubiquitin ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SUMO-targeted ubiquitin ligase complex subunit SLX8
    XP_446518.1
    • CAGL0G03553g
      Ortholog(s) have ubiquitin-protein transferase activity and role in cellular response to DNA damage stimulus, protein sumoylation, protein ubiquitination, telomere maintenance

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088957.1 Reference assembly

      Range
      358650..359282 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_446518.1 → XP_446518.1  SUMO-targeted ubiquitin ligase complex subunit SLX8 [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_446518.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W0D5T4, Q6FTC6
      Conserved Domains (1) summary
      COG5574
      Location:105 → 205
      PEX10; RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

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