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    HMPREF9448_RS08705 helix-turn-helix domain-containing protein [ Barnesiella intestinihominis YIT 11860 ]

    Gene ID: 77849016, updated on 9-Jan-2025

    Summary

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    Gene symbol
    HMPREF9448_RS08705
    Gene description
    helix-turn-helix domain-containing protein
    Locus tag
    HMPREF9448_RS08705
    Gene type
    protein coding
    Organism
    Barnesiella intestinihominis YIT 11860 (strain: YIT 11860, type-material: type strain of Barnesiella intestinihominis)
    Lineage
    Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella
    Old locus tag
    HMPREF9448_01777
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    Genomic context

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    NZ_JH815204.1Genomic Context describing neighboring genes Neighboring gene LuxR C-terminal-related transcriptional regulator Neighboring gene DUF2975 domain-containing protein Neighboring gene M16 family metallopeptidase Neighboring gene carbohydrate-binding family 9-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_JH815204.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural classification of HTH DNA-binding domains and protein-DNA interaction modes. Wintjens R, et al. J Mol Biol, 1996 Sep 20. PMID 8831795
    2. The helix-turn-helix DNA binding motif. Brennan RG, et al. J Biol Chem, 1989 Feb 5. PMID 2644244
    3. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    helix-turn-helix domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_JH815204.1 Reference assembly

      Range
      946889..947107
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_008862236.1 MULTISPECIES: helix-turn-helix domain-containing protein [Barnesiella]

      See identical proteins and their annotated locations for WP_008862236.1

      UniProtKB/TrEMBL
      A0A942AGU7, K0WXF5
      Conserved Domains (1) summary
      COG3655
      Location:1 → 71
      YozG; DNA-binding transcriptional regulator, XRE family [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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