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    metR transcriptional regulator MetR [ Pseudomonas chlororaphis ]

    Gene ID: 61652488, updated on 3-Dec-2024

    Summary

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    Gene symbol
    metR
    Gene description
    transcriptional regulator MetR
    Locus tag
    HLB40_RS23950
    Gene type
    protein coding
    Organism
    Pseudomonas chlororaphis (strain: qlu-1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    HLB40_23950
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    Genomic context

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    NZ_CP061079.1Genomic Context describing neighboring genes Neighboring gene alpha/beta fold hydrolase Neighboring gene 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase Neighboring gene GNAT family N-acetyltransferase Neighboring gene LysE family translocator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP061079.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Swarming of Pseudomonas aeruginosa is controlled by a broad spectrum of transcriptional regulators, including MetR. Yeung AT, et al. J Bacteriol, 2009 Sep. PMID 19592586, Free PMC Article
    2. Genome Sequence of Pseudomonas chlororaphis Strain PA23. Loewen PC, et al. Genome Announc, 2014 Jul 17. PMID 25035328, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transcriptional regulator MetR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP061079.1 Reference assembly

      Range
      5449008..5449925
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_009050584.1 MULTISPECIES: transcriptional regulator MetR [Pseudomonas]

      See identical proteins and their annotated locations for WP_009050584.1

      UniProtKB/TrEMBL
      A0A554PGD5, A0AAD1E8V5, A0AAJ0ZK46, A0AAQ0ANK0
      Conserved Domains (2) summary
      cd08441
      Location:93 → 290
      PBP2_MetR; The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold
      pfam00126
      Location:4 → 62
      HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
    Nucleotide Protein
    Heading Accession and Version

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