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    KLLA0_B02178g uncharacterized protein [ Kluyveromyces lactis ]

    Gene ID: 2896994, updated on 17-May-2024

    Summary

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    Gene symbol
    KLLA0_B02178g
    Gene description
    uncharacterized protein
    Locus tag
    KLLA0_B02178g
    See related
    FungiDB:KLLA0_B02178g; VEuPathDB:KLLA0_B02178g
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Kluyveromyces lactis (strain: NRRL Y-1140)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kluyveromyces
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    Genomic context

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    See KLLA0_B02178g in Genome Data Viewer
    Location:
    chromosome: B
    Exon count:
    1
    Sequence:
    Chromosome: B; NC_006038.1 (191448..195965, complement)

    Chromosome B - NC_006038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mitochondrial 37S ribosomal protein RSM23

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006038.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in histone catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Lid2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    uncharacterized protein
    XP_451628.1
    • similar to uniprot|P53127 Saccharomyces cerevisiae YGL131C SNT2 22% sequence identity with S. pombe Snt2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006038.1 Reference assembly

      Range
      191448..195965 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_451628.1 → XP_451628.1  uncharacterized protein KLLA0_B02178g [Kluyveromyces lactis]

      See identical proteins and their annotated locations for XP_451628.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q6CWR1
      Conserved Domains (5) summary
      cd04710
      Location:130 → 273
      BAH_fungalPHD; BAH, or Bromo Adjacent Homology domain, as present in fungal proteins containing PHD domains. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of ...
      cd15497
      Location:330 → 377
      PHD1_Snt2p_like; PHD finger 1 found in Saccharomyces cerevisiae SANT domain-containing protein 2 (Snt2p) and similar proteins
      cd15667
      Location:1167 → 1307
      ePHD_Snt2p_like; Extended PHD finger found in Saccharomyces cerevisiae SANT domain-containing protein 2 (Snt2p) and similar proteins
      cl21498
      Location:561 → 603
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
      cl22851
      Location:1101 → 1153
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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