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    ATU_RS05980 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [ Agrobacterium fabrum str. C58 ]

    Gene ID: 1133248, updated on 27-Aug-2024

    Summary

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    Gene symbol
    ATU_RS05980
    Gene description
    bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
    Locus tag
    ATU_RS05980
    Gene type
    protein coding
    Organism
    Agrobacterium fabrum str. C58 (strain: C58, culture-collection: ATCC:33970, type-material: type strain of Agrobacterium fabrum)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex
    Old locus tag
    AGR_C_2233; Atu1210
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    Genomic context

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    Location:
    chromosome: circular
    Sequence:
    Chromosome: circular; NC_003062.2 (1203727..1205715, complement)

    Chromosome circular - NC_003062.2Genomic Context describing neighboring genes Neighboring gene FMN-dependent NADH-azoreductase Neighboring gene LysR family transcriptional regulator Neighboring gene PilZ domain-containing protein Neighboring gene DUF1203 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003062.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and sequence analysis of the gene (cpdB) encoding periplasmic 2',3'-cyclic phosphodiesterase. Liu J, et al. J Bacteriol, 1986 Mar. PMID 3005231, Free PMC Article
    2. The genome of the natural genetic engineer Agrobacterium tumefaciens C58. Wood DW, et al. Science, 2001 Dec 14. PMID 11743193
    3. Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58. Goodner B, et al. Science, 2001 Dec 14. PMID 11743194

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003062.2 Reference assembly

      Range
      1203727..1205715 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_010971472.1 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [Agrobacterium fabrum]

      See identical proteins and their annotated locations for WP_010971472.1

      UniProtKB/TrEMBL
      A0A2W5H7U2, A9CJD4
    Nucleotide Protein
    Heading Accession and Version