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    AMD14_RS05305 tetratricopeptide repeat protein [ Xanthomonas citri pv. citri ]

    Gene ID: 66910129, updated on 1-Aug-2024

    Summary

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    Gene symbol
    AMD14_RS05305
    Gene description
    tetratricopeptide repeat protein
    Locus tag
    AMD14_RS05305
    Gene type
    protein coding
    Organism
    Xanthomonas citri pv. citri (strain: MN12, pathovar: citri, nat-host: citrus spp., sub-species: citri)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
    Old locus tag
    J164_01065; J164_RS05330
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    Genomic context

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    NZ_CP008998.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene polyphosphate kinase 2 Neighboring gene molybdenum cofactor biosynthesis protein B Neighboring gene peptide chain release factor 1 Neighboring gene pseudo Neighboring gene tetratricopeptide repeat protein Neighboring gene lipoprotein insertase outer membrane protein LolB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP008998.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Positive selection is the main driving force for evolution of citrus canker-causing Xanthomonas. Zhang Y, et al. ISME J, 2015 Oct. PMID 25689023, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    tetratricopeptide repeat protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP008998.1 Reference assembly

      Range
      1104477..1106183 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011050634.1 MULTISPECIES: tetratricopeptide repeat protein [Xanthomonas]

      See identical proteins and their annotated locations for WP_011050634.1

      UniProtKB/TrEMBL
      A0A0U5BQH4, A0A7S6Z107, A0A9X6BR52, A0AAI8EQ67, M4TT00
      Conserved Domains (2) summary
      COG3914
      Location:25 → 559
      Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
      sd00006
      Location:25 → 51
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version