U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PPRCHA0_RS26890 pilin [ Pseudomonas protegens CHA0 ]

    Gene ID: 57478255, updated on 16-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PPRCHA0_RS26890
    Gene description
    pilin
    Locus tag
    PPRCHA0_RS26890
    Gene type
    protein coding
    Organism
    Pseudomonas protegens CHA0 (strain: CHA0, type-material: type strain of Pseudomonas protegens)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PPRCHA0_5218
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1

    1 - NZ_LS999205.1Genomic Context describing neighboring genes Neighboring gene DUF748 domain-containing protein Neighboring gene BON domain-containing protein Neighboring gene type II secretion system F family protein Neighboring gene A24 family peptidase Neighboring gene dephospho-CoA kinase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_LS999205.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    pilin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_LS999205.1 Reference assembly

      Range
      5877244..5877660 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011063520.1 MULTISPECIES: pilin [Pseudomonas]

      See identical proteins and their annotated locations for WP_011063520.1

      UniProtKB/TrEMBL
      A0A9Q7R688, Q4K5X4
      Conserved Domains (2) summary
      pfam00114
      Location:35 → 133
      Pilin; Pilin (bacterial filament)
      cl29075
      Location:1 → 49
      ComP_DUS; Type IV minor pilin ComP, DNA uptake sequence receptor
    Nucleotide Protein
    Heading Accession and Version