U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    GZ59_RS06335 LysR family transcriptional regulator [ Pectobacterium atrosepticum ]

    Gene ID: 57208098, updated on 30-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    GZ59_RS06335
    Gene description
    LysR family transcriptional regulator
    Locus tag
    GZ59_RS06335
    Gene type
    protein coding
    Organism
    Pectobacterium atrosepticum (strain: 21A, nat-host: Solanum tuberosum)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
    Old locus tag
    GZ59_13140
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_CP009125.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene acyclic terpene utilization AtuA family protein Neighboring gene citrate:proton symporter Neighboring gene YpfN family protein Neighboring gene M15 family metallopeptidase Neighboring gene succinyl-diaminopimelate desuccinylase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_CP009125.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. SigmoID: a user-friendly tool for improving bacterial genome annotation through analysis of transcription control signals. Nikolaichik Y, et al. PeerJ, 2016. PMID 27257541, Free PMC Article
    2. Genome Sequence of Pectobacterium atrosepticum Strain 21A. Nikolaichik Y, et al. Genome Announc, 2014 Sep 18. PMID 25237028, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    LysR family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP009125.1 Reference assembly

      Range
      1444571..1445470
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011092876.1 LysR family transcriptional regulator [Pectobacterium atrosepticum]

      See identical proteins and their annotated locations for WP_011092876.1

      UniProtKB/TrEMBL
      Q6D7N7
      Conserved Domains (1) summary
      COG0583
      Location:3 → 298
      LysR; DNA-binding transcriptional regulator, LysR family [Transcription]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases