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    PluTT01m_RS01900 Hcp family type VI secretion system effector [ Photorhabdus laumondii subsp. laumondii ]

    Gene ID: 48846658, updated on 27-Aug-2024

    Summary

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    Gene symbol
    PluTT01m_RS01900
    Gene description
    Hcp family type VI secretion system effector
    Locus tag
    PluTT01m_RS01900
    Gene type
    protein coding
    Organism
    Photorhabdus laumondii subsp. laumondii (strain: TT01, nat-host: Heterorhabditis bacteriophora, sub-species: laumondii, culture-collection: DSM:15139, type-material: type strain of Photorhabdus laumondii)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Morganellaceae; Photorhabdus
    Old locus tag
    PluTT01m_01895
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    Genomic context

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    NZ_CP024901.1Genomic Context describing neighboring genes Neighboring gene type VI secretion system contractile sheath large subunit Neighboring gene type VI secretion system contractile sheath small subunit Neighboring gene 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ Neighboring gene glutathione-disulfide reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP024901.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Breadth and Molecular Basis of Hcp-Driven Type VI Secretion System Effector Delivery. Howard SA, et al. mBio, 2021 Jun 29. PMID 34061601, Free PMC Article
    2. Phenotypic and genomic comparison of Photorhabdus luminescens subsp. laumondii TT01 and a widely used rifampicin-resistant Photorhabdus luminescens laboratory strain. Zamora-Lagos MA, et al. BMC Genomics, 2018 Nov 29. PMID 30497380, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    Hcp family type VI secretion system effector

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP024901.1 Reference assembly

      Range
      401703..402221
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011144762.1 MULTISPECIES: Hcp family type VI secretion system effector [Photorhabdus]

      UniProtKB/TrEMBL
      A0A6L9JS77, Q7N9G3
    Nucleotide Protein
    Heading Accession and Version