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    sctD type III secretion system inner membrane ring subunit SctD [ Photorhabdus laumondii subsp. laumondii ]

    Gene ID: 48850011, updated on 27-Aug-2024

    Summary

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    Gene symbol
    sctD
    Gene description
    type III secretion system inner membrane ring subunit SctD
    Locus tag
    PluTT01m_RS19450
    Gene type
    protein coding
    Organism
    Photorhabdus laumondii subsp. laumondii (strain: TT01, nat-host: Heterorhabditis bacteriophora, sub-species: laumondii, culture-collection: DSM:15139, type-material: type strain of Photorhabdus laumondii)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Morganellaceae; Photorhabdus
    Old locus tag
    PluTT01m_19385
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    Genomic context

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    NZ_CP024901.1Genomic Context describing neighboring genes Neighboring gene T3SS regulon anti-activator ExsD domain-containing protein Neighboring gene YscB family type III secretion system chaperone Neighboring gene type III secretion system outer membrane ring subunit SctC Neighboring gene EscE/YscE/SsaE family type III secretion system needle protein co-chaperone Neighboring gene YscG family type III secretion system chaperone Neighboring gene YopR family T3SS polymerization control protein Neighboring gene type III secretion system needle filament subunit SctF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP024901.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Use of the Galleria mellonella caterpillar as a model host to study the role of the type III secretion system in Pseudomonas aeruginosa pathogenesis. Miyata S, et al. Infect Immun, 2003 May. PMID 12704110, Free PMC Article
    2. Type III Secretion: Building and Operating a Remarkable Nanomachine. Portaliou AG, et al. Trends Biochem Sci, 2016 Feb. PMID 26520801
    3. Phenotypic and genomic comparison of Photorhabdus luminescens subsp. laumondii TT01 and a widely used rifampicin-resistant Photorhabdus luminescens laboratory strain. Zamora-Lagos MA, et al. BMC Genomics, 2018 Nov 29. PMID 30497380, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type III secretion system inner membrane ring subunit SctD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP024901.1 Reference assembly

      Range
      4444665..4445933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011147920.1 MULTISPECIES: type III secretion system inner membrane ring subunit SctD [Photorhabdus]

      See identical proteins and their annotated locations for WP_011147920.1

      UniProtKB/TrEMBL
      A0A6L9JH10, Q7N0V0
    Nucleotide Protein
    Heading Accession and Version