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    lptC LPS export ABC transporter periplasmic protein LptC [ Aliivibrio fischeri ES114 ]

    Gene ID: 54163018, updated on 27-Aug-2024

    Summary

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    Gene symbol
    lptC
    Gene description
    LPS export ABC transporter periplasmic protein LptC
    Locus tag
    VF_RS01950
    Gene type
    protein coding
    Organism
    Aliivibrio fischeri ES114 (strain: ES114)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio
    Old locus tag
    VF0390; VF_0390
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    Genomic context

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    Location:
    chromosome: I
    Sequence:
    Chromosome: I; NC_006840.2 (423609..424172, complement)

    Chromosome I - NC_006840.2Genomic Context describing neighboring genes Neighboring gene RNA polymerase factor sigma-54 Neighboring gene LPS export ABC transporter ATP-binding protein Neighboring gene lipopolysaccharide transport periplasmic protein LptA Neighboring gene 3-deoxy-manno-octulosonate-8-phosphatase KdsC Neighboring gene arabinose-5-phosphate isomerase KdsD Neighboring gene calcium/sodium antiporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006840.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: focus on point miscalls and artefactual expansions. Mandel MJ, et al. BMC Genomics, 2008 Mar 25. PMID 18366731, Free PMC Article
    2. Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners. Ruby EG, et al. Proc Natl Acad Sci U S A, 2005 Feb 22. PMID 15703294, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LPS export ABC transporter periplasmic protein LptC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006840.2 Reference assembly

      Range
      423609..424172 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011261183.1 LPS export ABC transporter periplasmic protein LptC [Aliivibrio fischeri]

      See identical proteins and their annotated locations for WP_011261183.1

      UniProtKB/TrEMBL
      Q5E7W1
    Nucleotide Protein
    Heading Accession and Version