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    ndk nucleoside-diphosphate kinase [ Polynucleobacter asymbioticus QLW-P1DMWA-1 ]

    Gene ID: 31481681, updated on 11-Dec-2024

    Summary

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    Gene symbol
    ndk
    Gene description
    nucleoside-diphosphate kinase
    Locus tag
    PNUC_RS06780
    Gene type
    protein coding
    Organism
    Polynucleobacter asymbioticus QLW-P1DMWA-1 (strain: QLW-P1DMWA-1, culture-collection: DSM:18221, type-material: type strain of Polynucleobacter necessarius subsp. asymbioticus)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter
    Old locus tag
    Pnuc_1293
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    Genomic context

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    Sequence:
    NC_009379.1 (1365156..1365581, complement)

    NC_009379.1Genomic Context describing neighboring genes Neighboring gene flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase Neighboring gene 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN Neighboring gene Bax inhibitor-1 family protein Neighboring gene 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Neighboring gene 3'-5' exonuclease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009379.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The passive yet successful way of planktonic life: genomic and experimental analysis of the ecology of a free-living polynucleobacter population. Hahn MW, et al. PLoS One, 2012. PMID 22448227, Free PMC Article
    2. Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1(T)). Meincke L, et al. Stand Genomic Sci, 2012 Mar 19. PMID 22675600, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    nucleoside-diphosphate kinase
    WP_011903132.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009379.1 Reference assembly

      Range
      1365156..1365581 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011903132.1 nucleoside-diphosphate kinase [Polynucleobacter asymbioticus]

      UniProtKB/Swiss-Prot
      A4SYE3
      UniProtKB/TrEMBL
      A0AAC9NIK5
      Conserved Domains (2) summary
      PRK00668
      Location:3 → 135
      ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated
      pfam00334
      Location:4 → 138
      NDK; Nucleoside diphosphate kinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A4SYE3.1

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