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    UCRPA7_1537 putative telomere-binding alpha subunit central domain-containing protein [ Phaeoacremonium minimum UCRPA7 ]

    Gene ID: 19321695, updated on 18-Sep-2024

    Summary

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    Gene symbol
    UCRPA7_1537
    Gene description
    putative telomere-binding alpha subunit central domain-containing protein
    Locus tag
    UCRPA7_1537
    Gene type
    protein coding
    RNA name
    putative telomere-binding alpha subunit central domain-containing protein
    RefSeq status
    PROVISIONAL
    Organism
    Phaeoacremonium minimum UCRPA7 (strain: UCRPA7, nat-host: Vitis vinifera cv. Thompson)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Togniniales; Togniniaceae; Phaeoacremonium
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    Genomic context

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    See UCRPA7_1537 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_006921017.1Genomic Context describing neighboring genes Neighboring gene putative pre-mrna-splicing factor atp-dependent rna helicase prp22 protein Neighboring gene putative stag domain-containing protein Neighboring gene putative importin alpha subunit protein Neighboring gene putative alpha-l-rhamnosidase a protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006921017.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft Genome Sequence of the Ascomycete Phaeoacremonium aleophilum Strain UCR-PA7, a Causal Agent of the Esca Disease Complex in Grapevines. Blanco-Ulate B, et al. Genome Announc, 2013 Jun 27. PMID 23814032, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G-rich strand telomeric DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables telomerase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of telomere maintenance via telomerase IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in telomere capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome, telomeric region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nuclear telomere cap complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    putative telomere-binding alpha subunit central domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006921017.1 Reference assembly

      Range
      182026..184161 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007914117.1 → XP_007912308.1  putative telomere-binding alpha subunit central domain-containing protein [Phaeoacremonium minimum UCRPA7]

      See identical proteins and their annotated locations for XP_007912308.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      R8BUL1
      Conserved Domains (2) summary
      cd04497
      Location:23 → 136
      hPOT1_OB1_like; hPOT1_OB1_like: A subfamily of OB folds similar to the first OB fold (OB1) of human protection of telomeres 1 protein (hPOT1), the single OB fold of the N-terminal domain of Schizosaccharomyces pombe POT1 (SpPOT1), and the first OB fold of the N-terminal ...
      pfam16686
      Location:196 → 371
      POT1PC; ssDNA-binding domain of telomere protection protein
    Nucleotide Protein
    Heading Accession and Version

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