U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    pdxS pyridoxal 5'-phosphate synthase lyase subunit PdxS [ Bacillus pumilus SAFR-032 ]

    Gene ID: 5619224, updated on 27-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    pdxS
    Gene description
    pyridoxal 5'-phosphate synthase lyase subunit PdxS
    Locus tag
    BPUM_RS00085
    Gene type
    protein coding
    Organism
    Bacillus pumilus SAFR-032 (strain: SAFR-032)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BPUM_0507
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_009848.4 (20404..21288)

    NC_009848.4Genomic Context describing neighboring genes Neighboring gene D-alanyl-D-alanine carboxypeptidase family protein Neighboring gene PLP-dependent aminotransferase family protein Neighboring gene pyridoxal 5'-phosphate synthase glutaminase subunit PdxT Neighboring gene serine--tRNA ligase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_009848.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A highly conserved sequence is a novel gene involved in de novo vitamin B6 biosynthesis. Ehrenshaft M, et al. Proc Natl Acad Sci U S A, 1999 Aug 3. PMID 10430950, Free PMC Article
    2. SOR1, a gene required for photosensitizer and singlet oxygen resistance in Cercospora fungi, is highly conserved in divergent organisms. Ehrenshaft M, et al. Mol Cell, 1998 Mar. PMID 9660944
    3. Bacillus safensis FO-36b and Bacillus pumilus SAFR-032: a whole genome comparison of two spacecraft assembly facility isolates. Tirumalai MR, et al. BMC Microbiol, 2018 Jun 8. PMID 29884123, Free PMC Article
    4. An ICEBs1-like element may be associated with the extreme radiation and desiccation resistance of Bacillus pumilus SAFR-032 spores. Tirumalai MR, et al. Extremophiles, 2013 Sep. PMID 23812891
    5. Candidate genes that may be responsible for the unusual resistances exhibited by Bacillus pumilus SAFR-032 spores. Tirumalai MR, et al. PLoS One, 2013. PMID 23799069, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    pyridoxal 5'-phosphate synthase lyase subunit PdxS

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009848.4 Reference assembly

      Range
      20404..21288
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012009058.1 pyridoxal 5'-phosphate synthase lyase subunit PdxS [Bacillus pumilus]

      See identical proteins and their annotated locations for WP_012009058.1

      UniProtKB/Swiss-Prot
      A8FAD5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8FAD5.1