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    rnr ribonuclease R [ Bacillus pumilus SAFR-032 ]

    Gene ID: 5622321, updated on 27-Aug-2024

    Summary

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    Gene symbol
    rnr
    Gene description
    ribonuclease R
    Locus tag
    BPUM_RS15105
    Gene type
    protein coding
    Organism
    Bacillus pumilus SAFR-032 (strain: SAFR-032)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BPUM_3031
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    Genomic context

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    Sequence:
    NC_009848.4 (3016429..3018771, complement)

    NC_009848.4Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene SsrA-binding protein SmpB Neighboring gene carboxylesterase Neighboring gene preprotein translocase subunit SecG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009848.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The vacB gene required for virulence in Shigella flexneri and Escherichia coli encodes the exoribonuclease RNase R. Cheng ZF, et al. J Biol Chem, 1998 Jun 5. PMID 9603904
    2. Purification and characterization of the Escherichia coli exoribonuclease RNase R. Comparison with RNase II. Cheng ZF, et al. J Biol Chem, 2002 Jun 14. PMID 11948193
    3. Bacillus safensis FO-36b and Bacillus pumilus SAFR-032: a whole genome comparison of two spacecraft assembly facility isolates. Tirumalai MR, et al. BMC Microbiol, 2018 Jun 8. PMID 29884123, Free PMC Article
    4. An ICEBs1-like element may be associated with the extreme radiation and desiccation resistance of Bacillus pumilus SAFR-032 spores. Tirumalai MR, et al. Extremophiles, 2013 Sep. PMID 23812891
    5. Candidate genes that may be responsible for the unusual resistances exhibited by Bacillus pumilus SAFR-032 spores. Tirumalai MR, et al. PLoS One, 2013. PMID 23799069, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    ribonuclease R
    WP_012011280.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009848.4 Reference assembly

      Range
      3016429..3018771 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012011280.1 MULTISPECIES: ribonuclease R [Bacillus]

      See identical proteins and their annotated locations for WP_012011280.1

      UniProtKB/TrEMBL
      A8FHG8
    Nucleotide Protein
    Heading Accession and Version