U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    SBAL678_RS39710 glycosyl hydrolase family 18 protein [ Shewanella baltica OS678 ]

    Gene ID: 11774903, updated on 15-Apr-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    SBAL678_RS39710
    Gene description
    glycosyl hydrolase family 18 protein
    Locus tag
    SBAL678_RS39710
    Gene type
    protein coding
    Organism
    Shewanella baltica OS678 (strain: OS678)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
    Old locus tag
    Sbal678_3243
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_016901.1 (3752117..3754723, complement)

    NC_016901.1Genomic Context describing neighboring genes Neighboring gene short-chain fatty acid transporter Neighboring gene FKBP-type peptidyl-prolyl cis-trans isomerase Neighboring gene ROK family protein Neighboring gene aminopeptidase P family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_016901.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Crystal structure of a bacterial chitinase at 2.3 A resolution. Perrakis A, et al. Structure, 1994 Dec 15. PMID 7704527
    2. Genome sequencing of five Shewanella baltica strains recovered from the oxic-anoxic interface of the Baltic Sea. Caro-Quintero A, et al. J Bacteriol, 2012 Mar. PMID 22328742, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    glycosyl hydrolase family 18 protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_016901.1 Reference assembly

      Range
      3752117..3754723 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012197422.1 glycosyl hydrolase family 18 protein [Shewanella baltica]

      See identical proteins and their annotated locations for WP_012197422.1

      UniProtKB/TrEMBL
      A9KYC7
      Conserved Domains (4) summary
      cd06548
      Location:163 → 547
      GH18_chitinase; The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an ...
      cd12215
      Location:774 → 815
      ChiC_BD; Chitin-binding domain of chitinase C
      pfam02010
      Location:573 → 766
      REJ; REJ domain
      pfam08329
      Location:28 → 155
      ChitinaseA_N; Chitinase A, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version