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    DACI_RS19860 type II toxin-antitoxin system VapC family toxin [ Delftia acidovorans SPH-1 ]

    Gene ID: 24116857, updated on 21-Nov-2024

    Summary

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    Gene symbol
    DACI_RS19860
    Gene description
    type II toxin-antitoxin system VapC family toxin
    Locus tag
    DACI_RS19860
    Gene type
    protein coding
    Organism
    Delftia acidovorans SPH-1 (strain: SPH-1)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
    Old locus tag
    Daci_3962
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    Genomic context

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    Sequence:
    NC_010002.1 (4363059..4363472)

    NC_010002.1Genomic Context describing neighboring genes Neighboring gene cell wall metabolism sensor histidine kinase WalK Neighboring gene type II toxin-antitoxin system Phd/YefM family antitoxin Neighboring gene 3-deoxy-D-manno-octulosonic acid transferase Neighboring gene phosphomannomutase/phosphoglucomutase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_010002.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mineralization of individual congeners of linear alkylbenzenesulfonate by defined pairs of heterotrophic bacteria. Schleheck D, et al. Appl Environ Microbiol, 2004 Jul. PMID 15240283, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type II toxin-antitoxin system VapC family toxin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010002.1 Reference assembly

      Range
      4363059..4363472
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012205787.1 MULTISPECIES: type II toxin-antitoxin system VapC family toxin [Delftia]

      See identical proteins and their annotated locations for WP_012205787.1

      UniProtKB/TrEMBL
      A9BWR6
      Conserved Domains (1) summary
      cd18746
      Location:3 → 132
      PIN_VapC4-5_FitB-like; uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily
    Nucleotide Protein
    Heading Accession and Version