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    DACI_RS25175 LysR family transcriptional regulator [ Delftia acidovorans SPH-1 ]

    Gene ID: 24118216, updated on 21-Nov-2024

    Summary

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    Gene symbol
    DACI_RS25175
    Gene description
    LysR family transcriptional regulator
    Locus tag
    DACI_RS25175
    Gene type
    protein coding
    Organism
    Delftia acidovorans SPH-1 (strain: SPH-1)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
    Old locus tag
    Daci_4979
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    Genomic context

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    Sequence:
    NC_010002.1 (5512647..5513603, complement)

    NC_010002.1Genomic Context describing neighboring genes Neighboring gene hydantoinase B/oxoprolinase family protein Neighboring gene putative hydro-lyase Neighboring gene LysR family transcriptional regulator Neighboring gene tripartite tricarboxylate transporter substrate binding protein Neighboring gene 4-hydroxythreonine-4-phosphate dehydrogenase PdxA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_010002.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mineralization of individual congeners of linear alkylbenzenesulfonate by defined pairs of heterotrophic bacteria. Schleheck D, et al. Appl Environ Microbiol, 2004 Jul. PMID 15240283, Free PMC Article
    2. Molecular biology of the LysR family of transcriptional regulators. Schell MA. Annu Rev Microbiol, 1993. PMID 8257110
    3. Structure and function of the LysR-type transcriptional regulator (LTTR) family proteins. Maddocks SE, et al. Microbiology (Reading), 2008 Dec. PMID 19047729

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LysR family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010002.1 Reference assembly

      Range
      5512647..5513603 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012206778.1 MULTISPECIES: LysR family transcriptional regulator [Delftia]

      See identical proteins and their annotated locations for WP_012206778.1

      UniProtKB/TrEMBL
      A9BMR3
      Conserved Domains (2) summary
      pfam00126
      Location:19 → 78
      HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
      cl21456
      Location:108 → 307
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
    Nucleotide Protein
    Heading Accession and Version