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    LSE_RS01760 polysaccharide deacetylase family protein [ Listeria seeligeri serovar 1/2b str. SLCC3954 ]

    Gene ID: 32488449, updated on 13-Dec-2024

    Summary

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    Gene symbol
    LSE_RS01760
    Gene description
    polysaccharide deacetylase family protein
    Locus tag
    LSE_RS01760
    Gene type
    protein coding
    Organism
    Listeria seeligeri serovar 1/2b str. SLCC3954 (strain: SLCC3954, serovar: 1/2b, type-material: type strain of Listeria seeligeri)
    Lineage
    Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria
    Old locus tag
    lse_0341
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    Genomic context

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    Sequence:
    NC_013891.1 (366121..366960, complement)

    NC_013891.1Genomic Context describing neighboring genes Neighboring gene NfeD family protein Neighboring gene flotillin-like protein FloA Neighboring gene hypothetical protein Neighboring gene DUF3298 and DUF4163 domain-containing protein Neighboring gene RNA polymerase sigma factor Neighboring gene Crp/Fnr family transcriptional regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013891.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of Listeria seeligeri, a nonpathogenic member of the genus Listeria. Steinweg C, et al. J Bacteriol, 2010 Mar. PMID 20061480, Free PMC Article
    2. Carbohydrate esterase family 4 enzymes: substrate specificity. Caufrier F, et al. Carbohydr Res, 2003 Mar 28. PMID 12644381

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    polysaccharide deacetylase family protein
    WP_012984840.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013891.1 Reference assembly

      Range
      366121..366960 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012984840.1 polysaccharide deacetylase family protein [Listeria seeligeri]

      See identical proteins and their annotated locations for WP_012984840.1

      Conserved Domains (2) summary
      cd10944
      Location:78 → 266
      CE4_SmPgdA_like; Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins
      TIGR04243
      Location:80 → 266
      nodulat_NodB; chitooligosaccharide deacetylase NodB
    Nucleotide Protein
    Heading Accession and Version