U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    RCAP_RS04795 site-specific integrase [ Rhodobacter capsulatus SB 1003 ]

    Gene ID: 31489888, updated on 22-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    RCAP_RS04795
    Gene description
    site-specific integrase
    Locus tag
    RCAP_RS04795
    Gene type
    protein coding
    Organism
    Rhodobacter capsulatus SB 1003 (strain: SB 1003)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Rhodobacter group; Rhodobacter
    Old locus tag
    RCAP_rcc00950
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_014034.1 (1041679..1042908)

    NC_014034.1Genomic Context describing neighboring genes Neighboring gene AlpA family transcriptional regulator Neighboring gene hypothetical protein Neighboring gene type I restriction-modification system endonuclease Neighboring gene class I SAM-dependent DNA methyltransferase Neighboring gene GIY-YIG nuclease family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_014034.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003. Strnad H, et al. J Bacteriol, 2010 Jul. PMID 20418398, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    site-specific integrase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014034.1 Reference assembly

      Range
      1041679..1042908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013066694.1 site-specific integrase [Rhodobacter capsulatus]

      See identical proteins and their annotated locations for WP_013066694.1

      UniProtKB/TrEMBL
      D5AQQ9
      Conserved Domains (3) summary
      cd00796
      Location:219 → 383
      INT_Rci_Hp1_C; Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain
      pfam13356
      Location:5 → 84
      Arm-DNA-bind_3; Arm DNA-binding domain
      cl29123
      Location:98 → 152
      Phage_int_SAM_3; Phage integrase, N-terminal SAM-like domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases