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    ACAV_RS20420 tail fiber protein [ Paracidovorax avenae ATCC 19860 ]

    Gene ID: 34239209, updated on 1-Jul-2024

    Summary

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    Gene symbol
    ACAV_RS20420
    Gene description
    tail fiber protein
    Locus tag
    ACAV_RS20420
    Gene type
    protein coding
    Organism
    Paracidovorax avenae ATCC 19860 (strain: ATCC 19860, sub-species: avenae, culture-collection: ATCC:19860, type-material: type strain of Pseudomonas avenae)
    Lineage
    Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Paracidovorax
    Old locus tag
    Acav_4117
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    Genomic context

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    Sequence:
    NC_015138.1 (4702286..4702900, complement)

    NC_015138.1Genomic Context describing neighboring genes Neighboring gene DUF4136 domain-containing protein Neighboring gene histidine phosphatase family protein Neighboring gene DSD1 family PLP-dependent enzyme Neighboring gene tail fiber protein Neighboring gene tail fiber protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_015138.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The structure of the receptor-binding domain of the bacteriophage T4 short tail fibre reveals a knitted trimeric metal-binding fold. Thomassen E, et al. J Mol Biol, 2003 Aug 8. PMID 12888344
    2. Molecular characterization and regulation of the rhizosphere-expressed genes rhiABCR that can influence nodulation by Rhizobium leguminosarum biovar viciae. Cubo MT, et al. J Bacteriol, 1992 Jun. PMID 1597418, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    tail fiber protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015138.1 Reference assembly

      Range
      4702286..4702900 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013596480.1 tail fiber protein [Paracidovorax avenae]

      See identical proteins and their annotated locations for WP_013596480.1

      UniProtKB/TrEMBL
      F0Q551
      Conserved Domains (2) summary
      COG4675
      Location:3 → 203
      MdpB; Microcystin-dependent protein (function unknown) [Function unknown]
      pfam07484
      Location:7 → 59
      Collar; Phage Tail Collar Domain
    Nucleotide Protein
    Heading Accession and Version

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