U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PAGR_RS23445 GhoT/OrtT family toxin [ Pantoea ananatis PA13 ]

    Gene ID: 57270574, updated on 1-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PAGR_RS23445
    Gene description
    GhoT/OrtT family toxin
    Locus tag
    PAGR_RS23445
    Gene type
    protein coding
    Organism
    Pantoea ananatis PA13 (strain: PA13)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea
    Old locus tag
    PAGR_p216
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    plasmid: PAGR_p
    Sequence:
    NC_017553.1 (248541..248714)

    NC_017553.1Genomic Context describing neighboring genes Neighboring gene glycine betaine/L-proline transporter ProP Neighboring gene YbhB/YbcL family Raf kinase inhibitor-like protein Neighboring gene pseudo Neighboring gene H(+)/Cl(-) exchange transporter ClcA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_017553.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Orphan toxin OrtT (YdcX) of Escherichia coli reduces growth during the stringent response. Islam S, et al. Toxins (Basel), 2015 Jan 29. PMID 25643179, Free PMC Article
    2. Type II toxin/antitoxin MqsR/MqsA controls type V toxin/antitoxin GhoT/GhoS. Wang X, et al. Environ Microbiol, 2013 Jun. PMID 23289863, Free PMC Article
    3. A new type V toxin-antitoxin system where mRNA for toxin GhoT is cleaved by antitoxin GhoS. Wang X, et al. Nat Chem Biol, 2012 Oct. PMID 22941047, Free PMC Article
    4. Complete genome sequence of the rice pathogen Pantoea ananatis strain PA13. Choi O, et al. J Bacteriol, 2012 Jan. PMID 22207741, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    GhoT/OrtT family toxin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_017553.1 Reference assembly

      Range
      248541..248714
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_014333244.1 MULTISPECIES: GhoT/OrtT family toxin [Pantoea]

      UniProtKB/TrEMBL
      A0A0H3L7W7, A0A8A4K1E0, A0AAJ3YEJ0
      Conserved Domains (1) summary
      pfam10753
      Location:4 → 57
      Toxin_GhoT_OrtT; Toxin GhoT_OrtT
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases