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    TE101_RS17780 EAL and HDOD domain-containing protein [ Alteromonas macleodii ]

    Gene ID: 56268696, updated on 14-Dec-2024

    Summary

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    Gene symbol
    TE101_RS17780
    Gene description
    EAL and HDOD domain-containing protein
    Locus tag
    TE101_RS17780
    Gene type
    protein coding
    Organism
    Alteromonas macleodii (strain: Te101, nat-host: Trichodesmium erythraeum IMS101)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group; Alteromonas
    Old locus tag
    TE101_17800
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    Genomic context

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    NZ_CP018321.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase sigma factor RpoH Neighboring gene EAL and HDOD domain-containing protein Neighboring gene permease-like cell division protein FtsX Neighboring gene cell division ATP-binding protein FtsE Neighboring gene signal recognition particle-docking protein FtsY

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP018321.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dimerisation induced formation of the active site and the identification of three metal sites in EAL-phosphodiesterases. Bellini D, et al. Sci Rep, 2017 Feb 10. PMID 28186120, Free PMC Article
    2. Structural insight into the mechanism of c-di-GMP hydrolysis by EAL domain phosphodiesterases. Tchigvintsev A, et al. J Mol Biol, 2010 Sep 24. PMID 20691189, Free PMC Article
    3. GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility. Simm R, et al. Mol Microbiol, 2004 Aug. PMID 15306016
    4. Benefit from decline: the primary transcriptome of Alteromonas macleodii str. Te101 during Trichodesmium demise. Hou S, et al. ISME J, 2018 Apr. PMID 29335641, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    EAL and HDOD domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP018321.1 Reference assembly

      Range
      4110976..4112211
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_014950989.1 MULTISPECIES: EAL and HDOD domain-containing protein [Alteromonas]

      See identical proteins and their annotated locations for WP_014950989.1

      UniProtKB/TrEMBL
      A0A1E7D9F9
      Conserved Domains (1) summary
      COG3434
      Location:1 → 402
      YuxH; c-di-GMP-related signal transduction protein, contains EAL and HDOD domains [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version