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    Y79_RS0117590 Cof-type HAD-IIB family hydrolase [ Bacillus siamensis KCTC 13613 ]

    Gene ID: 76428643, updated on 24-Mar-2024

    Summary

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    Gene symbol
    Y79_RS0117590
    Gene description
    Cof-type HAD-IIB family hydrolase
    Locus tag
    Y79_RS0117590
    Gene type
    protein coding
    Organism
    Bacillus siamensis KCTC 13613 (strain: KCTC 13613(T), culture-collection: KCTC:13613, type-material: type strain of Bacillus siamensis Sumpavapol et al. 2010)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus amyloliquefaciens group
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    Genomic context

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    NZ_AJVF01000041.1Genomic Context describing neighboring genes Neighboring gene MBL fold metallo-hydrolase Neighboring gene MurR/RpiR family transcriptional regulator Neighboring gene Cof-type HAD-IIB family hydrolase Neighboring gene DUF2651 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_AJVF01000041.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the plant growth-promoting bacterium Bacillus siamensis KCTC 13613T. Jeong H, et al. J Bacteriol, 2012 Aug. PMID 22815459, Free PMC Article
    2. Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied enzymes. Burroughs AM, et al. J Mol Biol, 2006 Sep 1. PMID 16889794

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    Cof-type HAD-IIB family hydrolase
    WP_016938858.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AJVF01000041.1 Reference assembly

      Range
      406971..407783
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_016938858.1 Cof-type HAD-IIB family hydrolase [Bacillus siamensis]

      Conserved Domains (3) summary
      cd01427
      Location:5 → 108
      HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
      pfam08282
      Location:6 → 259
      Hydrolase_3; haloacid dehalogenase-like hydrolase
      cl21460
      Location:199 → 264
      HAD_like; Haloacid Dehalogenase-like Hydrolases