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    LTQ54_RS02260 outer membrane beta-barrel protein [ Vibrio splendidus ]

    Gene ID: 72396396, updated on 13-May-2024

    Summary

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    Gene symbol
    LTQ54_RS02260
    Gene description
    outer membrane beta-barrel protein
    Locus tag
    LTQ54_RS02260
    Gene type
    protein coding
    Organism
    Vibrio splendidus (strain: 2_C04b, nat-host: Magallana gigas)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    LTQ54_02260
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    Genomic context

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    Location:
    chromosome: 1

    1 - NZ_CP089203.1Genomic Context describing neighboring genes Neighboring gene TetR/AcrR family transcriptional regulator Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ATP-dependent RNA helicase HrpA Neighboring gene MipA/OmpV family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP089203.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    outer membrane beta-barrel protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP089203.1 Reference assembly

      Range
      455848..456342 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_017077897.1 MULTISPECIES: outer membrane beta-barrel protein [Vibrio]

      UniProtKB/TrEMBL
      A0A1A6M0C0
      Conserved Domains (1) summary
      cl21487
      Location:13 → 163
      OM_channels; Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative ) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20) ...
    Nucleotide Protein
    Heading Accession and Version

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