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    rbsD D-ribose pyranase [ Bacillus altitudinis ]

    Gene ID: 66361135, updated on 3-Apr-2024

    Summary

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    Gene symbol
    rbsD
    Gene description
    D-ribose pyranase
    Locus tag
    ID12_RS02540
    Gene type
    protein coding
    Organism
    Bacillus altitudinis (strain: GR-8)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    ID12_02625
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    Genomic context

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    NZ_CP009108.1Genomic Context describing neighboring genes Neighboring gene GerAB/ArcD/ProY family transporter Neighboring gene Ger(x)C family spore germination protein Neighboring gene LacI family DNA-binding transcriptional regulator Neighboring gene ribokinase Neighboring gene sugar ABC transporter ATP-binding protein Neighboring gene ribose ABC transporter permease RbsC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP009108.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of Bacillus pumilus BA06, a producer of alkaline serine protease with leather-dehairing function. Zhao CW, et al. J Bacteriol, 2012 Dec. PMID 23144411, Free PMC Article
    2. Crystallization and preliminary X-ray crystallographic analysis of Escherichia coli RbsD, a component of the ribose-transport system with unknown biochemical function. Kim MS, et al. Acta Crystallogr D Biol Crystallogr, 2001 May. PMID 11320319
    3. Crystal structures of RbsD leading to the identification of cytoplasmic sugar-binding proteins with a novel folding architecture. Kim MS, et al. J Biol Chem, 2003 Jul 25. PMID 12738765
    4. NMR application probes a novel and ubiquitous family of enzymes that alter monosaccharide configuration. Ryu KS, et al. J Biol Chem, 2004 Jun 11. PMID 15060078
    5. Structural insights into the monosaccharide specificity of Escherichia coli rhamnose mutarotase. Ryu KS, et al. J Mol Biol, 2005 May 27. PMID 15876375

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    D-ribose pyranase
    WP_017360008.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP009108.1 Reference assembly

      Range
      513594..513986
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_017360008.1 MULTISPECIES: D-ribose pyranase [Bacillus]

      See identical proteins and their annotated locations for WP_017360008.1

      UniProtKB/TrEMBL
      A0A5D4P552, A0A653X201, A0A9X0KCY9
      Conserved Domains (1) summary
      PRK11797
      Location:1 → 130
      PRK11797; D-ribose pyranase; Provisional
    Nucleotide Protein
    Heading Accession and Version