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    BID BH3 interacting domain death agonist [ Ficedula albicollis (Collared flycatcher) ]

    Gene ID: 101821709, updated on 14-Nov-2024

    Summary

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    Gene symbol
    BID
    Gene description
    BH3 interacting domain death agonist
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ficedula albicollis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
    Orthologs
    human mouse all
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    Genomic context

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    See BID in Genome Data Viewer
    Location:
    chromosome: 1A
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current FicAlb1.5 (GCF_000247815.1) 1A NC_021672.1 (72597472..72615141)

    Chromosome 1A - NC_021672.1Genomic Context describing neighboring genes Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 3 Neighboring gene uncharacterized LOC101819465 Neighboring gene BCL2 like 13 Neighboring gene ATPase H+ transporting V1 subunit E1 Neighboring gene uncharacterized LOC107604607

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_021672.1 Chromosome 1A Reference FicAlb1.5 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in apoptotic mitochondrial changes IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of extrinsic apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of intrinsic apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of release of cytochrome c from mitochondria IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BH3-interacting domain death agonist

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference FicAlb1.5 Primary Assembly

    Genomic

    1. NC_021672.1 Reference FicAlb1.5 Primary Assembly

      Range
      72597472..72615141
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005040382.2 → XP_005040439.1  BH3-interacting domain death agonist isoform X1

      Conserved Domains (1) summary
      pfam06393
      Location:5 → 182
      BID; BH3 interacting domain (BID)

    2. XM_005040383.2 → XP_005040440.1  BH3-interacting domain death agonist isoform X2

      UniProtKB/TrEMBL
      U3K4T9
      Conserved Domains (1) summary
      pfam06393
      Location:5 → 184
      BID; BH3 interacting domain (BID)
    Nucleotide Protein
    Heading Accession and Version

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