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    HDLBP high density lipoprotein binding protein [ Camelus ferus (Wild Bactrian camel) ]

    Gene ID: 102516022, updated on 10-Mar-2024

    Summary

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    Gene symbol
    HDLBP
    Gene description
    high density lipoprotein binding protein
    Locus tag
    CB1_000575004
    See related
    EnsemblRapid:ENSCFEG00005000140
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camelus ferus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
    Orthologs
    human mouse all
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    Genomic context

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    See HDLBP in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 5 NC_045700.1 (97128510..97188500, complement)
    101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210751.1 (153552..182688, complement)

    Chromosome 5 - NC_045700.1Genomic Context describing neighboring genes Neighboring gene inverted formin-2-like Neighboring gene anoctamin 7 Neighboring gene septin 2 Neighboring gene FERM, ARH/RhoGEF and pleckstrin domain protein 2 Neighboring gene serine/threonine kinase 25

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vigilin
    Names
    vigilin-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BCGSAC_Cfer_1.0 Primary Assembly

    Genomic

    1. NC_045700.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

      Range
      97128510..97188500 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032480758.1 → XP_032336649.1  vigilin

      UniProtKB/TrEMBL
      A0A8B8T308
      Conserved Domains (1) summary
      cl00098
      Location:875 → 969
      KH-I; K homology (KH) RNA-binding domain, type I

    2. XM_032480759.1 → XP_032336650.1  vigilin

      UniProtKB/TrEMBL
      A0A8B8T308
      Related
      ENSCFEP00005000137.1, ENSCFET00005000196.1
      Conserved Domains (1) summary
      cl00098
      Location:875 → 969
      KH-I; K homology (KH) RNA-binding domain, type I

    3. XM_032480757.1 → XP_032336648.1  vigilin

      UniProtKB/TrEMBL
      A0A8B8T308
      Conserved Domains (1) summary
      cl00098
      Location:875 → 969
      KH-I; K homology (KH) RNA-binding domain, type I
    Nucleotide Protein
    Heading Accession and Version

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