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    Tex19 testis expressed 19 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

    Gene ID: 101973613, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Tex19
    Gene description
    testis expressed 19
    Locus tag
    H1C71_021224
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ictidomys tridecemlineatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
    Orthologs
    human all
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    Genomic context

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    See Tex19 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405602.1 (567996..569990, complement)
    102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936923.1 (807..1835)

    NW_024405602.1Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene urotensin 2 receptor Neighboring gene uncharacterized LOC120884518 Neighboring gene secreted and transmembrane 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in male gonad development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in placenta development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    testis-expressed protein 19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HiC_Itri_2 Primary Assembly

    Genomic

    1. NW_024405602.1 Reference HiC_Itri_2 Primary Assembly

      Range
      567996..569990 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005341974.2 → XP_005342031.1  testis-expressed protein 19

      UniProtKB/TrEMBL
      I3NCS6
      Conserved Domains (1) summary
      pfam15553
      Location:1 → 149
      TEX19; Testis-expressed protein 19
    Nucleotide Protein
    Heading Accession and Version

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