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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001122842.3 → NP_001116314.1 nuclear receptor coactivator 7 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AK127512, AK294558, AL035689, AL834442, BX537385, DA770225
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:769 → 931
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
NM_001199619.2 → NP_001186548.1 nuclear receptor coactivator 7 isoform 1
See identical proteins and their annotated locations for NP_001186548.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) has an alternate 5' UTR, compared to variant 1. Variants 1, 3 and 4 encode the same longest isoform (1).
- Source sequence(s)
-
AF493978, AL035689, AL078594, AL834442, BC137094, BX537385
- Consensus CDS
-
CCDS5132.1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
- Related
- ENSP00000357341.3, ENST00000368357.7
- Conserved Domains (2) summary
-
- smart00584
Location:780 → 942
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
NM_001199620.2 → NP_001186549.1 nuclear receptor coactivator 7 isoform 1
See identical proteins and their annotated locations for NP_001186549.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) has an alternate 5' UTR, compared to variant 1. Variants 1, 3 and 4 encode the same longest isoform (1).
- Source sequence(s)
-
AF493978, AK294558, AL035689, AL078594, AL834442, BC137094, BX537385
- Consensus CDS
-
CCDS5132.1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:780 → 942
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
NM_001199621.2 → NP_001186550.1 nuclear receptor coactivator 7 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks an internal exon, resulting in a downstream in-frame AUG start codon, and uses an alternate in-frame splice site, compared to variant 1. The resulting isoform (3) has a shorter N-terminus and lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AK294558, AL035689, AL834442, BC137094, BX537385, DA770225
- Consensus CDS
-
CCDS56448.1
- UniProtKB/TrEMBL
-
Q8N3C8
- Related
- ENSP00000229634.9, ENST00000229634.13
- Conserved Domains (2) summary
-
- smart00584
Location:665 → 827
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:18 → 54
- LysM; LysM domain
-
NM_001199622.2 → NP_001186551.1 nuclear receptor coactivator 7 isoform 4
See identical proteins and their annotated locations for NP_001186551.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks multiple exons from the 5' end and has an alternate 5' exon, compared to variant 1. The resulting isoform (4) is much shorter and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK094706, AL035689, AL834442, BX537385, DA992384
- Consensus CDS
-
CCDS83125.1
- UniProtKB/TrEMBL
- A0A023IN41, H0Y5F6
- Related
- ENSP00000398268.2, ENST00000438495.6
- Conserved Domains (1) summary
-
- smart00584
Location:57 → 219
- TLDc; domain in TBC and LysM domain containing proteins
-
NM_181782.5 → NP_861447.3 nuclear receptor coactivator 7 isoform 1
See identical proteins and their annotated locations for NP_861447.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) and variants 3 and 4 encode the same longest isoform (1).
- Source sequence(s)
-
AK294558, AL035689, AL834442, BC137094, BX537385, DA770225
- Consensus CDS
-
CCDS5132.1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
- Related
- ENSP00000376269.2, ENST00000392477.7
- Conserved Domains (2) summary
-
- smart00584
Location:780 → 942
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
125781115..125932034
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047418206.1 → XP_047274162.1 nuclear receptor coactivator 7 isoform X1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_047418207.1 → XP_047274163.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:769 → 931
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
XM_024446332.2 → XP_024302100.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:769 → 931
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
XM_017010270.2 → XP_016865759.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:769 → 931
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
XM_006715340.5 → XP_006715403.1 nuclear receptor coactivator 7 isoform X1
See identical proteins and their annotated locations for XP_006715403.1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:780 → 942
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
XM_017010274.3 → XP_016865763.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:769 → 931
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
XM_005266822.5 → XP_005266879.1 nuclear receptor coactivator 7 isoform X1
See identical proteins and their annotated locations for XP_005266879.1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:780 → 942
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
XM_017010273.3 → XP_016865762.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:769 → 931
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
XM_024446331.2 → XP_024302099.1 nuclear receptor coactivator 7 isoform X1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:780 → 942
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
XM_017010272.3 → XP_016865761.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:769 → 931
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
-
XM_017010269.2 → XP_016865758.1 nuclear receptor coactivator 7 isoform X1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
- Conserved Domains (2) summary
-
- smart00584
Location:780 → 942
- TLDc; domain in TBC and LysM domain containing proteins
- pfam01476
Location:122 → 158
- LysM; LysM domain
RNA
-
XR_007059204.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
126969790..127120723
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054354274.1 → XP_054210249.1 nuclear receptor coactivator 7 isoform X1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354277.1 → XP_054210252.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354278.1 → XP_054210253.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354275.1 → XP_054210250.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354271.1 → XP_054210246.1 nuclear receptor coactivator 7 isoform X1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354280.1 → XP_054210255.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354272.1 → XP_054210247.1 nuclear receptor coactivator 7 isoform X1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354279.1 → XP_054210254.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354270.1 → XP_054210245.1 nuclear receptor coactivator 7 isoform X1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354276.1 → XP_054210251.1 nuclear receptor coactivator 7 isoform X2
- UniProtKB/TrEMBL
-
B3KXK4
-
XM_054354273.1 → XP_054210248.1 nuclear receptor coactivator 7 isoform X1
- UniProtKB/Swiss-Prot
- B2RNS2, B7Z2C4, B9EH71, G8JL91, Q3LID6, Q4G0V1, Q5TF95, Q6IPQ4, Q6NE83, Q86T89, Q8N1W4, Q8NI08
- UniProtKB/TrEMBL
-
B3KXK4
RNA
-
XR_008487257.1 RNA Sequence