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    DHG2 L-rhamnose-1-dehydrogenase [ Scheffersomyces stipitis CBS 6054 ]

    Gene ID: 4840981, updated on 21-Dec-2023

    Summary

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    Gene symbol
    DHG2
    Gene description
    L-rhamnose-1-dehydrogenase
    Locus tag
    PICST_50944
    Gene type
    protein coding
    RNA name
    Glucose 1-dehydrogenase II (GLCDH-II)
    RefSeq status
    PROVISIONAL
    Organism
    Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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    Genomic context

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    See DHG2 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Sequence:
    Chromosome: 8; NC_009048.1 (187502..188278)

    Chromosome 8 - NC_009048.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene L-rhamnonate dehydratase Neighboring gene L-rhamnono-gamma-lactonase Neighboring gene L-KDR aldolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009048.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification in the yeast Pichia stipitis of the first L-rhamnose-1-dehydrogenase gene. Koivistoinen OM, et al. FEBS J, 2008 May. PMID 18400031
    2. Eukaryotic and bacterial gene clusters related to an alternative pathway of nonphosphorylated L-rhamnose metabolism. Watanabe S, et al. J Biol Chem, 2008 Jul 18. PMID 18505728
    3. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    L-rhamnose-1-dehydrogenase
    XP_001386434.2
    • Glucose 1-dehydrogenase II (GLCDH-II) (bacterial)
      go_function oxidoreductase activity
      go_process metabolism

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009048.1 Reference assembly

      Range
      187502..188278
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001386397.1 → XP_001386434.2  L-rhamnose-1-dehydrogenase [Scheffersomyces stipitis CBS 6054]

      See identical proteins and their annotated locations for XP_001386434.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A3LZU7
      Conserved Domains (2) summary
      PRK05557
      Location:5 → 253
      fabG; 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
      cl21454
      Location:5 → 253
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A3LZU7.2

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