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    zfyve1 zinc finger, FYVE domain containing 1 [ Haplochromis burtoni (Burton's mouthbrooder) ]

    Gene ID: 102305032, updated on 10-Mar-2024

    Summary

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    Gene symbol
    zfyve1
    Gene description
    zinc finger, FYVE domain containing 1
    See related
    Ensembl:ENSHBUG00000022728
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Haplochromis burtoni
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
    Orthologs
    human zebrafish all
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    Genomic context

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    See zfyve1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582389.1 (498311..505245, complement)
    101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179420.1 (497611..504004, complement)

    NW_024582389.1Genomic Context describing neighboring genes Neighboring gene double PHD fingers 3 Neighboring gene WD repeat domain 21 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class H Neighboring gene ras homolog family member V Neighboring gene VPS18 core subunit of CORVET and HOPS complexes

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger FYVE domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NCSU_Asbu1 Primary Assembly

    Genomic

    1. NW_024582389.1 Reference NCSU_Asbu1 Primary Assembly

      Range
      498311..505245 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042219109.1 → XP_042075043.1  zinc finger FYVE domain-containing protein 1

      UniProtKB/TrEMBL
      A0A3Q2X593
      Conserved Domains (5) summary
      cd01851
      Location:174 → 410
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:711 → 771
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:594 → 655
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    2. XM_005917616.3 → XP_005917678.1  zinc finger FYVE domain-containing protein 1

      See identical proteins and their annotated locations for XP_005917678.1

      UniProtKB/TrEMBL
      A0A3Q2X593
      Conserved Domains (5) summary
      cd01851
      Location:174 → 410
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:711 → 771
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:594 → 655
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    3. XM_042219108.1 → XP_042075042.1  zinc finger FYVE domain-containing protein 1

      UniProtKB/TrEMBL
      A0A3Q2X593
      Conserved Domains (5) summary
      cd01851
      Location:174 → 410
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:711 → 771
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:594 → 655
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    4. XM_014332191.2 → XP_014187677.1  zinc finger FYVE domain-containing protein 1

      UniProtKB/TrEMBL
      A0A3Q2X593
      Conserved Domains (5) summary
      cd01851
      Location:174 → 410
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:711 → 771
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:594 → 655
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    5. XM_005917614.3 → XP_005917676.1  zinc finger FYVE domain-containing protein 1

      See identical proteins and their annotated locations for XP_005917676.1

      UniProtKB/TrEMBL
      A0A3Q2X593
      Related
      ENSHBUP00000034864.1
      Conserved Domains (5) summary
      cd01851
      Location:174 → 410
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:711 → 771
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:594 → 655
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    6. XM_005917615.3 → XP_005917677.1  zinc finger FYVE domain-containing protein 1

      See identical proteins and their annotated locations for XP_005917677.1

      UniProtKB/TrEMBL
      A0A3Q2X593
      Conserved Domains (5) summary
      cd01851
      Location:174 → 410
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:711 → 771
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:594 → 655
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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