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    SI:CH211-266I6.3 cytoskeleton-associated protein 2 [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102345427, updated on 26-Apr-2024

    Summary

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    Gene symbol
    SI:CH211-266I6.3
    Gene description
    cytoskeleton-associated protein 2
    See related
    Ensembl:ENSLACG00000004327
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Also known as
    CKAP2
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    Genomic context

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    See SI:CH211-266I6.3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 4 NC_088142.1 (178799465..178829374, complement)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819863.1 (117899..148200, complement)

    Chromosome 4 - NC_088142.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase Nek5 Neighboring gene NIMA related kinase 3 Neighboring gene vacuolar protein sorting 36 homolog Neighboring gene thrombospondin type-1 domain-containing protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of microtubule depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytoskeleton-associated protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088142.1 Reference fLatCha1.pri

      Range
      178799465..178829374 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006002753.3 → XP_006002815.1  cytoskeleton-associated protein 2

      UniProtKB/TrEMBL
      H3A5E8
      Related
      ENSLACP00000004869.1
      Conserved Domains (1) summary
      pfam15297
      Location:285 → 643
      CKAP2_C; Cytoskeleton-associated protein 2 C-terminus
    Nucleotide Protein
    Heading Accession and Version

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