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    LOC102563357 olfactory receptor 10T2-like [ Alligator mississippiensis (American alligator) ]

    Gene ID: 102563357, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC102563357
    Gene description
    olfactory receptor 10T2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Alligator mississippiensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
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    Genomic context

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    See LOC102563357 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_09 current rAllMis1 (GCF_030867095.1) 2 NC_081825.1 (173174681..173177491)
    102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709282.1 (50948..52275, complement)

    Chromosome 2 - NC_081825.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene zinc finger protein 397 Neighboring gene olfactory receptor 5AR1-like Neighboring gene uncharacterized LOC132248378

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    olfactory receptor 10T2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAllMis1 Primary Assembly

    Genomic

    1. NC_081825.1 Reference rAllMis1 Primary Assembly

      Range
      173174681..173177491
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006267487.3 → XP_006267549.1  olfactory receptor 10T2-like

      Conserved Domains (2) summary
      pfam00001
      Location:42 → 290
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:31 → 307
      7tm_4; Olfactory receptor
    Nucleotide Protein
    Heading Accession and Version

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