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    EHI_045500 uncharacterized protein [ Entamoeba histolytica HM-1:IMSS ]

    Gene ID: 3407900, updated on 17-May-2024

    Summary

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    Gene symbol
    EHI_045500
    Gene description
    uncharacterized protein
    Locus tag
    EHI_045500
    See related
    AmoebaDB:EHI_045500; VEuPathDB:EHI_045500
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Entamoeba histolytica HM-1:IMSS (strain: HM-1:IMSS)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
    Old locus tag
    78.t00022
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    Genomic context

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    See EHI_045500 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001914862.1Genomic Context describing neighboring genes Neighboring gene high mobility group (HMG) box domain containing protein Neighboring gene SP-RING zinc finger domain containing protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001914862.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the protist parasite Entamoeba histolytica. Loftus B, et al. Nature, 2005 Feb 24. PMID 15729342
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endosome fission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endosome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of WASH complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_653588.1
    • encoded by transcript EHI_045500A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001914862.1 Reference assembly

      Range
      160432..163785
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_648496.1 → XP_653588.1  uncharacterized protein EHI_045500 [Entamoeba histolytica HM-1:IMSS]

      See identical proteins and their annotated locations for XP_653588.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A175JDT7, A0A5K1VJ65, C4LTG1, M2S3U5, M3U0C7, M7VX47, N9UKP2
      Conserved Domains (1) summary
      pfam10266
      Location:22 → 1062
      Strumpellin; Hereditary spastic paraplegia protein strumpellin
    Nucleotide Protein
    Heading Accession and Version

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