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    Zfp36 ZFP36 ring finger protein [ Rattus rattus (black rat) ]

    Gene ID: 116892393, updated on 18-Mar-2024

    Summary

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    Gene symbol
    Zfp36
    Gene description
    ZFP36 ring finger protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs
    human mouse all
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    Genomic context

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    See Zfp36 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 2 NC_046155.1 (167615453..167617961)

    Chromosome 2 - NC_046155.1Genomic Context describing neighboring genes Neighboring gene PAF1 homolog, Paf1/RNA polymerase II complex component Neighboring gene mediator complex subunit 29 Neighboring gene transfer RNA isoleucine (anticodon UAU) Neighboring gene pleckstrin homology and RhoGEF domain containing G2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046155.1 Chromosome 2 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence of a rat TIS11 cDNA, an immediate early gene induced by growth factors and phorbol esters. Kaneda N, et al. Gene, 1992 Sep 10. PMID 1511903
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mRNA decay activator protein ZFP36

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046155.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      167615453..167617961
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032894065.1 → XP_032749956.1  mRNA decay activator protein ZFP36

      Conserved Domains (1) summary
      COG5063
      Location:103 → 195
      CTH1; CCCH-type Zn-finger protein [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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