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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_007368.1 RefSeqGene
- Range
-
5001..8607
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_43
mRNA and Protein(s)
-
NM_000626.4 → NP_000617.1 B-cell antigen receptor complex-associated protein beta chain isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) uses an alternate in-frame splice site in the 5' coding region, compared to variant 3. The encoded isoform (1) is shorter compared to isoform 3, but has identical N- and C- termini.
- Source sequence(s)
-
AA804163, AC127029, M89957
- Consensus CDS
-
CCDS11655.1
- UniProtKB/Swiss-Prot
- P40259, Q53FS2, Q9BU06
- Related
- ENSP00000006750.4, ENST00000006750.8
- Conserved Domains (2) summary
-
- smart00077
Location:193 → 212
- ITAM; Immunoreceptor tyrosine-based activation motif
- cd16096
Location:51 → 142
- IgV_CD79b_beta; Immunoglobulin variable domain (IgV)
-
NM_001039933.3 → NP_001035022.1 B-cell antigen receptor complex-associated protein beta chain isoform 3 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).
- Source sequence(s)
-
AK222954
- Consensus CDS
-
CCDS42372.1
- UniProtKB/Swiss-Prot
-
P40259
- Related
- ENSP00000376544.3, ENST00000392795.7
- Conserved Domains (3) summary
-
- smart00077
Location:194 → 213
- ITAM; Immunoreceptor tyrosine-based activation motif
- smart00410
Location:51 → 143
- IG_like; Immunoglobulin like
- pfam07686
Location:49 → 143
- V-set; Immunoglobulin V-set domain
-
NM_001329050.2 → NP_001315979.1 B-cell antigen receptor complex-associated protein beta chain isoform 4 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon in its 5' coding region compared to variant 3. The encoded isoform (4) is shorter than isoform 3.
- Source sequence(s)
-
AC127029
- Conserved Domains (1) summary
-
- smart00077
Location:90 → 109
- ITAM; Immunoreceptor tyrosine-based activation motif
-
NM_021602.4 → NP_067613.1 B-cell antigen receptor complex-associated protein beta chain isoform 2 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site and also lacks an exon in the coding region, compared to variant 3. The encoded isoform (2) is shorter compared to isoform 3, but has identical N- and C- termini.
- Source sequence(s)
-
AK222954, M89957, X83539
- Consensus CDS
-
CCDS11656.1
- UniProtKB/Swiss-Prot
-
P40259
- Related
- ENSP00000245862.2, ENST00000349817.2
- Conserved Domains (1) summary
-
- smart00077
Location:89 → 108
- ITAM; Immunoreceptor tyrosine-based activation motif
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
63928740..63932331 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
64799505..64803094 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)