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    DCLRE1C DNA cross-link repair 1C [ Lipotes vexillifer (Yangtze River dolphin) ]

    Gene ID: 103084340, updated on 11-Mar-2024

    Summary

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    Gene symbol
    DCLRE1C
    Gene description
    DNA cross-link repair 1C
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lipotes vexillifer
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
    Orthologs
    human mouse all
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    Genomic context

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    See DCLRE1C in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006787833.1 (2580050..2631245)

    NW_006787833.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103090417 Neighboring gene meiosis/spermiogenesis associated 1 Neighboring gene SUV39H2 histone lysine methyltransferase Neighboring gene heat shock protein family A (Hsp70) member 14 Neighboring gene uncharacterized LOC103085264

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006787833 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-3' DNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables damaged DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via nonhomologous end joining IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protection from non-homologous end joining at telomere IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein artemis

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Lipotes_vexillifer_v1 Primary Assembly

    Genomic

    1. NW_006787833.1 Reference Lipotes_vexillifer_v1 Primary Assembly

      Range
      2580050..2631245
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007460885.1 → XP_007460947.1  protein artemis

      UniProtKB/TrEMBL
      A0A340XLE0
      Conserved Domains (2) summary
      pfam07522
      Location:239 → 343
      DRMBL; DNA repair metallo-beta-lactamase
      cd16297
      Location:1 → 171
      artemis-SNM1C-like_MBL-fold; artemis-SNM1C and related proteins; MBL-fold metallo-hydrolase domain
    Nucleotide Protein
    Heading Accession and Version

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