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    CENPK centromere protein K [ Monodelphis domestica (gray short-tailed opossum) ]

    Gene ID: 100018841, updated on 8-May-2024

    Summary

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    Gene symbol
    CENPK
    Gene description
    centromere protein K
    See related
    EnsemblRapid:ENSMODG00000043462
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Monodelphis domestica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
    Orthologs
    human mouse all
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    Genomic context

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    See CENPK in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 3 NC_077229.1 (500624295..500668477)
    103 previous assembly MonDom5 (GCF_000002295.2) 3 NC_008803.1 (30725841..30769699, complement)

    Chromosome 3 - NC_077229.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 13 Neighboring gene tripartite motif containing 23 Neighboring gene peptidylprolyl isomerase domain and WD repeat containing 1 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 6 Neighboring gene CWC27 spliceosome associated cyclophilin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in kinetochore assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic sister chromatid segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centromere protein K

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMonDom1.pri

    Genomic

    1. NC_077229.1 Reference mMonDom1.pri

      Range
      500624295..500668477
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007486392.3 → XP_007486454.1  centromere protein K isoform X1

      See identical proteins and their annotated locations for XP_007486454.1

      UniProtKB/TrEMBL
      A0A5F8H2W7
      Related
      ENSMODP00000053899.1, ENSMODT00000070926.2
      Conserved Domains (1) summary
      pfam11802
      Location:12 → 270
      CENP-K; Centromere-associated protein K

    2. XM_016431320.2 → XP_016286806.1  centromere protein K isoform X1

      UniProtKB/TrEMBL
      A0A5F8H2W7
      Conserved Domains (1) summary
      pfam11802
      Location:12 → 270
      CENP-K; Centromere-associated protein K

    3. XM_007486391.3 → XP_007486453.1  centromere protein K isoform X1

      See identical proteins and their annotated locations for XP_007486453.1

      UniProtKB/TrEMBL
      A0A5F8H2W7
      Conserved Domains (1) summary
      pfam11802
      Location:12 → 270
      CENP-K; Centromere-associated protein K

    4. XM_016431318.2 → XP_016286804.1  centromere protein K isoform X1

      UniProtKB/TrEMBL
      A0A5F8H2W7
      Conserved Domains (1) summary
      pfam11802
      Location:12 → 270
      CENP-K; Centromere-associated protein K

    5. XM_007486393.2 → XP_007486455.1  centromere protein K isoform X1

      See identical proteins and their annotated locations for XP_007486455.1

      UniProtKB/TrEMBL
      A0A5F8H2W7
      Conserved Domains (1) summary
      pfam11802
      Location:12 → 270
      CENP-K; Centromere-associated protein K

    6. XM_007486394.3 → XP_007486456.1  centromere protein K isoform X2

      Conserved Domains (1) summary
      pfam11802
      Location:27 → 220
      CENP-K; Centromere-associated protein K
    Nucleotide Protein
    Heading Accession and Version

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