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    bocks bocksbeutel [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41162, updated on 9-Dec-2024

    Summary

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    Official Symbol
    bocksprovided by FlyBase
    Official Full Name
    bocksbeutelprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037719
    Locus tag
    Dmel_CG9424
    See related
    AllianceGenome:FB:FBgn0037719
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Bocks; Bocksbeutel; CG9424; Dmel\CG9424; emerin
    Summary
    Located in cytoplasm; membrane; and nucleus. Is expressed in adult head and organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See bocks in Genome Data Viewer
    Location:
    85D27-85D27; 3-48 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9589468..9591002, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5415190..5416724, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Son RNA binding protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene P58IPK Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ensconsin-dependent changes in microtubule organization and LINC complex-dependent changes in nucleus-nucleus interactions result in quantitatively distinct myonuclear positioning defects. Collins MA, et al. Mol Biol Cell, 2021 Nov 1. PMID 34524872, Free PMC Article
    2. Drosophila emerins control LINC complex localization and transcription to regulate myonuclear position. Mandigo TR, et al. J Cell Sci, 2019 Oct 18. PMID 31548202
    3. Role of the smallish gene during Drosophila eye development. Tanaka R, et al. Gene, 2019 Feb 5. PMID 30359736
    4. Two novel LEM-domain proteins are splice products of the annotated Drosophila melanogaster gene CG9424 (Bocksbeutel). Wagner N, et al. Eur J Cell Biol, 2004 Jan. PMID 15035436
    5. The Drosophila melanogaster LEM-domain protein MAN1. Wagner N, et al. Eur J Cell Biol, 2006 Feb. PMID 16439308

    See all (47) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nuclear envelope IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bocksbeutel
    Names
    CG9424-PA
    CG9424-PB
    bocks-PA
    bocks-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      9589468..9591002 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141660.4 → NP_649917.1  bocksbeutel, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649917.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q709R6
      Related
      FBpp0099981
      Conserved Domains (1) summary
      smart00540
      Location:5 → 48
      LEM; in nuclear membrane-associated proteins

    2. NM_001014611.3 → NP_001014611.1  bocksbeutel, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001014611.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q709R6, Q8SZZ5, Q9VHA7
      Conserved Domains (1) summary
      smart00540
      Location:5 → 48
      LEM; in nuclear membrane-associated proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q709R6.1 Q709R6

    Gene LinkOut

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