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    A1O5_03202 uncharacterized protein [ Cladophialophora psammophila CBS 110553 ]

    Gene ID: 19187932, updated on 17-May-2024

    Summary

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    Gene symbol
    A1O5_03202
    Gene description
    uncharacterized protein
    Locus tag
    A1O5_03202
    See related
    FungiDB:A1O5_03202; VEuPathDB:A1O5_03202
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cladophialophora psammophila CBS 110553 (strain: CBS 110553, culture-collection: CBS:110553, type-material: culture from type material of Cladophialophora psammophila)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Cladophialophora
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    Genomic context

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    See A1O5_03202 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_006912925.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene 40S ribosomal protein S19 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006912925.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006912925.1 Reference assembly

      Range
      782846..786090 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007743815.1 → XP_007742005.1  uncharacterized protein A1O5_03202 [Cladophialophora psammophila CBS 110553]

      See identical proteins and their annotated locations for XP_007742005.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W9WZ13
      Conserved Domains (2) summary
      smart00184
      Location:188 → 224
      RING; Ring finger
      pfam01485
      Location:252 → 313
      IBR; IBR domain, a half RING-finger domain
    Nucleotide Protein
    Heading Accession and Version

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