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    LOC103183094 RING finger protein 223-like [ Callorhinchus milii (elephant shark) ]

    Gene ID: 103183094, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103183094
    Gene description
    RING finger protein 223-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callorhinchus milii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
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    Genomic context

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    See LOC103183094 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704749.1 (18866800..18869560)
    100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890130.1 (373360..373962, complement)

    NW_024704749.1Genomic Context describing neighboring genes Neighboring gene B-box and SPRY domain containing Neighboring gene WD repeat domain 31 Neighboring gene E3 ubiquitin-protein ligase RNF183 Neighboring gene pre-mRNA splicing tri-snRNP complex factor PRPF4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING finger protein 223-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IMCB_Cmil_1.0 Primary Assembly

    Genomic

    1. NW_024704749.1 Reference IMCB_Cmil_1.0 Primary Assembly

      Range
      18866800..18869560
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007900364.2 → XP_007898555.1  RING finger protein 223-like

      Conserved Domains (2) summary
      cd00162
      Location:11 → 57
      RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
      cl17238
      Location:10 → 58
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    2. XM_042337783.1 → XP_042193717.1  RING finger protein 223-like

      Conserved Domains (2) summary
      cd00162
      Location:11 → 57
      RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
      cl17238
      Location:10 → 58
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version

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