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    HMPREF0273_RS0106085 helix-turn-helix domain-containing protein [ Coprobacillus cateniformis ]

    Gene ID: 78229079, updated on 3-Dec-2024

    Summary

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    Gene symbol
    HMPREF0273_RS0106085
    Gene description
    helix-turn-helix domain-containing protein
    Locus tag
    HMPREF0273_RS0106085
    Gene type
    protein coding
    Organism
    Coprobacillus cateniformis (strain: D6, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacillota; Erysipelotrichia; Erysipelotrichales; Coprobacillaceae; Coprobacillus
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    Genomic context

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    NZ_AKCB01000001.1Genomic Context describing neighboring genes Neighboring gene site-specific integrase Neighboring gene excisionase Neighboring gene sigma factor-like helix-turn-helix DNA-binding protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_AKCB01000001.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Finished bacterial genomes from shotgun sequence data. Ribeiro FJ, et al. Genome Res, 2012 Nov. PMID 22829535, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    helix-turn-helix domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AKCB01000001.1 Reference assembly

      Range
      1166580..1166819 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_025487352.1 MULTISPECIES: helix-turn-helix domain-containing protein [Bacillota]

      UniProtKB/TrEMBL
      A0A1Q2CB94, A0A564T9V2, A0A7G9GTW7, A0A8J6M2I3, A0A8J6P834, A0A9E0ZGK5, A0A9P3YQD4, A0AAP2XMU7
      Conserved Domains (1) summary
      pfam12645
      Location:8 → 72
      HTH_16; Helix-turn-helix domain