U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    zfyve1 zinc finger, FYVE domain containing 1 [ Stegastes partitus (bicolor damselfish) ]

    Gene ID: 103357286, updated on 11-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    zfyve1
    Gene description
    zinc finger, FYVE domain containing 1
    See related
    Ensembl:ENSSPAG00000007896
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Stegastes partitus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See zfyve1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577975.1 (544814..553860)

    NW_007577975.1Genomic Context describing neighboring genes Neighboring gene ras homolog family member V Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class H Neighboring gene WD repeat domain 21 Neighboring gene double PHD fingers 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_007577975 unplaced scaffold reference Stegastes_partitus-1.0.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger FYVE domain-containing protein 1-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Stegastes_partitus-1.0.2

    Genomic

    1. NW_007577975.1 Reference Stegastes_partitus-1.0.2

      Range
      544814..553860
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008281778.1 → XP_008280000.1  zinc finger FYVE domain-containing protein 1-like isoform X1

      UniProtKB/TrEMBL
      A0A3B5A9U6, A0A9Y4JP90
      Related
      ENSSPAP00000010397.1, ENSSPAT00000010577.1
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:593 → 654
      PHD_SF; PHD finger superfamily

    2. XM_008281779.1 → XP_008280001.1  zinc finger FYVE domain-containing protein 1-like isoform X2

      UniProtKB/TrEMBL
      A0A3B5A9U6, A0A9Y4MT11
      Conserved Domains (3) summary
      cd01851
      Location:37 → 273
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:574 → 634
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:457 → 518
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.