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    LOC103373746 cGMP-dependent protein kinase 1-like [ Stegastes partitus (bicolor damselfish) ]

    Gene ID: 103373746, updated on 31-Jan-2024

    Summary

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    Gene symbol
    LOC103373746
    Gene description
    cGMP-dependent protein kinase 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Stegastes partitus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
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    Genomic context

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    See LOC103373746 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007579785.1 (19457..72370, complement)

    NW_007579785.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 13 member C Neighboring gene APOBEC1 complementation factor-like Neighboring gene APOBEC1 complementation factor-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_007579785 unplaced scaffold reference Stegastes_partitus-1.0.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cGMP-dependent protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cGMP-dependent protein kinase 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Stegastes_partitus-1.0.2

    Genomic

    1. NW_007579785.1 Reference Stegastes_partitus-1.0.2

      Range
      19457..72370 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008303716.1 → XP_008301938.1  cGMP-dependent protein kinase 1-like isoform X3

      UniProtKB/TrEMBL
      A0A9Y4NR74
      Conserved Domains (2) summary
      cd05572
      Location:71 → 331
      STKc_cGK; Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG)
      pfam00069
      Location:65 → 324
      Pkinase; Protein kinase domain

    2. XM_008303714.1 → XP_008301936.1  cGMP-dependent protein kinase 1-like isoform X1

      UniProtKB/TrEMBL
      A0A9Y4NR10
      Conserved Domains (6) summary
      PTZ00263
      Location:373 → 681
      PTZ00263; protein kinase A catalytic subunit; Provisional
      cd12086
      Location:4 → 55
      DD_cGKI-beta; Dimerization/Docking domain of Cyclic GMP-dependent Protein Kinase I beta
      smart00133
      Location:641 → 691
      S_TK_X; Extension to Ser/Thr-type protein kinases
      COG0664
      Location:231 → 341
      Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
      cd00038
      Location:238 → 336
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      cd05572
      Location:386 → 646
      STKc_cGK; Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG)

    3. XM_008303715.1 → XP_008301937.1  cGMP-dependent protein kinase 1-like isoform X2

      UniProtKB/TrEMBL
      A0A9Y4NRH1
      Conserved Domains (3) summary
      PTZ00263
      Location:58 → 366
      PTZ00263; protein kinase A catalytic subunit; Provisional
      smart00133
      Location:326 → 376
      S_TK_X; Extension to Ser/Thr-type protein kinases
      cd05572
      Location:71 → 331
      STKc_cGK; Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG)
    Nucleotide Protein
    Heading Accession and Version

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