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    RpS23 Ribosomal protein S23 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36576, updated on 9-Dec-2024

    Summary

    Official Symbol
    RpS23provided by FlyBase
    Official Full Name
    Ribosomal protein S23provided by FlyBase
    Primary source
    FLYBASE:FBgn0033912
    Locus tag
    Dmel_CG8415
    See related
    AllianceGenome:FB:FBgn0033912
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Posey158; anon-EST:Posey63; CG8415; CT24703; Dmel\CG8415; Rp S23; Rps23; RPS23; S12
    Summary
    A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Part of cytosolic small ribosomal subunit. Is expressed in adult head and adult heart. Used to study brachycephaly, trichomegaly, and developmental delay. Human ortholog(s) of this gene implicated in brachycephaly, trichomegaly, and developmental delay. Orthologous to human RPS23 (ribosomal protein S23). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See RpS23 in Genome Data Viewer
    Location:
    50E4-50E4; 2-69 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (14215096..14216627, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (10102601..10104132, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Vesicular GABA Transporter Neighboring gene Sox box protein 15 Neighboring gene mir-308 stem loop Neighboring gene uncharacterized protein Neighboring gene Optic atrophy 1 Neighboring gene mir-1016 stem loop

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    PubMed 
    involved_in cytoplasmic translation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in cytosolic ribosome HDA PubMed 
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of cytosolic small ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of cytosolic small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of cytosolic small ribosomal subunit TAS
    Traceable Author Statement
    more info
    PubMed 
    is_active_in ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    part_of small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ribosomal protein S23
    Names
    CG8415-PA
    CG8415-PB
    RpS23-PA
    RpS23-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      14215096..14216627 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137095.3NP_610939.2  ribosomal protein S23, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610939.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8T3U2, Q9V6Z0
      UniProtKB/TrEMBL
      A0A0B4LFD9
      Related
      FBpp0086701
      Conserved Domains (1) summary
      PTZ00067
      Location:1143
      PTZ00067; 40S ribosomal S23; Provisional
    2. NM_001299481.1NP_001286410.1  ribosomal protein S23, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286410.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8T3U2, Q9V6Z0
      UniProtKB/TrEMBL
      A0A0B4LFD9
      Conserved Domains (1) summary
      PTZ00067
      Location:1143
      PTZ00067; 40S ribosomal S23; Provisional