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    rab18 Rab GTPase [ Dictyostelium discoideum AX4 ]

    Gene ID: 8627345, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rab18
    Official Full Name
    Rab GTPase
    Primary source
    dictyBase:DDB_G0289827
    Locus tag
    DDB_G0289827
    See related
    AmoebaDB:DDB_G0289827; VEuPathDB:DDB_G0289827
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
    Old locus tag
    DDBDRAFT_0188592; DDBDRAFT_0229409; DDB_0188592; DDB_0229409
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    Try the new Transcript table

    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_007091.3 (3292859..3293559, complement)

    Chromosome 5 - NC_007091.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene O-methyltransferase family 2 protein Neighboring gene hypothetical protein Neighboring gene IQ calmodulin-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007091.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional analysis of novel Rab GTPases identified in the proteome of purified Legionella-containing vacuoles from macrophages. Hoffmann C, et al. Cell Microbiol, 2014 Jul. PMID 24373249
    2. Dictyostelium lipid droplets host novel proteins. Du X, et al. Eukaryot Cell, 2013 Nov. PMID 24036346, Free PMC Article
    3. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by dictyBase

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in lipid droplet organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in lipid droplet HDA PubMed 
    located_in pathogen-containing vacuole HDA PubMed 

    General protein information

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    Preferred Names
    Rab GTPase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007091.3 Reference assembly

      Range
      3292859..3293559 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_630927.1 → XP_636019.1  Rab GTPase [Dictyostelium discoideum AX4]

      See identical proteins and their annotated locations for XP_636019.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q54GY8
      Conserved Domains (2) summary
      smart00175
      Location:7 → 170
      RAB; Rab subfamily of small GTPases
      cd01863
      Location:7 → 167
      Rab18; Rab GTPase family 18 (Rab18)
    Nucleotide Protein
    Heading Accession and Version

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