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    SKIL SKI like proto-oncogene [ Corvus brachyrhynchos (American crow) ]

    Gene ID: 103625077, updated on 3-Aug-2024

    Summary

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    Gene symbol
    SKIL
    Gene description
    SKI like proto-oncogene
    Locus tag
    N302_03695
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Corvus brachyrhynchos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
    Also known as
    Ski-like
    Orthologs
    human mouse all
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    Genomic context

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    See SKIL in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008236696.1 (543784..558816)

    NW_008236696.1Genomic Context describing neighboring genes Neighboring gene polyhomeotic homolog 3 Neighboring gene protein kinase C iota Neighboring gene claudin 11 Neighboring gene solute carrier family 7 member 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008236696.1 Unplaced Scaffold Reference ASM69197v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SMAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ski-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69197v1

    Genomic

    1. NW_008236696.1 Reference ASM69197v1

      Range
      543784..558816
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008644455.2 → XP_008642677.1  ski-like protein

      See identical proteins and their annotated locations for XP_008642677.1

      UniProtKB/TrEMBL
      A0A091ECA9
      Conserved Domains (3) summary
      smart01046
      Location:264 → 359
      c-SKI_SMAD_bind; c-SKI Smad4 binding domain
      PRK03918
      Location:530 → 678
      PRK03918; DNA double-strand break repair ATPase Rad50
      cd21084
      Location:140 → 239
      DHD_Sno; Dachshund-homology domain found in Ski-like protein (Sno) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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