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    PAN0_001c0881 retinal short-chain dehydrogenase/reductase [ Moesziomyces antarcticus ]

    Gene ID: 26301290, updated on 29-Dec-2023

    Summary

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    Gene symbol
    PAN0_001c0881
    Gene description
    retinal short-chain dehydrogenase/reductase
    Locus tag
    PAN0_001c0881
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Moesziomyces antarcticus (strain: JCM 10317, type-material: type material of Sporobolomyces antarcticus)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces
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    Genomic context

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    See PAN0_001c0881 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_014639009.1Genomic Context describing neighboring genes Neighboring gene FMN-linked oxidoreductase Neighboring gene GNAT family Neighboring gene uncharacterized protein Neighboring gene DUF567 domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_014639009.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft Genome Sequence of the Yeast Pseudozyma antarctica Type Strain JCM10317, a Producer of the Glycolipid Biosurfactants, Mannosylerythritol Lipids. Saika A, et al. Genome Announc, 2014 Sep 25. PMID 25291760, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    retinal short-chain dehydrogenase/reductase
    XP_014659981.1
    • top hit is XP_007875968.1 originated in Pseudozyma flocculosa PF-1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_014639009.1 Reference assembly

      Range
      2368281..2369527
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014804495.1 → XP_014659981.1  retinal short-chain dehydrogenase/reductase [Moesziomyces antarcticus]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5C3FFQ7, M9MC48
      Conserved Domains (1) summary
      cl21454
      Location:103 → 358
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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