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    EHI_054740 60S ribosomal protein L17, putative [ Entamoeba histolytica HM-1:IMSS ]

    Gene ID: 3406387, updated on 17-May-2024

    Summary

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    Gene symbol
    EHI_054740
    Gene description
    60S ribosomal protein L17, putative
    Locus tag
    EHI_054740
    See related
    AmoebaDB:EHI_054740; VEuPathDB:EHI_054740
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Entamoeba histolytica HM-1:IMSS (strain: HM-1:IMSS)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
    Old locus tag
    133.t00019
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    Genomic context

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    See EHI_054740 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001914940.1Genomic Context describing neighboring genes Neighboring gene CDP-alcohol phosphatidyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene phosphatidate cytidylyltransferase, putative Neighboring gene peptidyl prolyl cis-trans isomerase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001914940.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the protist parasite Entamoeba histolytica. Loftus B, et al. Nature, 2005 Feb 24. PMID 15729342
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L17, putative
    XP_652070.1
    • encoded by transcript EHI_054740A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001914940.1 Reference assembly

      Range
      26592..27179
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_646978.2 → XP_652070.1  60S ribosomal protein L17, putative [Entamoeba histolytica HM-1:IMSS]

      See identical proteins and their annotated locations for XP_652070.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A175JPY5, A0A5K1VRD8, C4M2J3, M2QCQ8, M7W089, M7WWM2, N9TLH9
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 179
      PTZ00178; 60S ribosomal protein L17; Provisional
    Nucleotide Protein
    Heading Accession and Version

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